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  • Top cofit genes for PP_2936 from Pseudomonas putida KT2440

    putative ATP-binding component of a transport system
    SEED: ABC transporter, ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1302 putative metal-binding hydrolase-oxidase enzyme no 0.20
    2 PP_3761 Sensor histidine kinase/response regulator no 0.19
    3 PP_4766 ATP-dependent RNA helicase 0.34 0.19
    4 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB 0.91 0.19
    5 PP_1279 Probable alginate O-acetylase AlgJ no 0.19
    6 PP_1702 Recombination-associated protein RdgC 0.60 0.19
    7 PP_2551 Transcriptional regulator, LysR family no 0.19
    8 PP_5143 conserved membrane protein of unknown function no 0.18
    9 PP_3777 conserved protein of unknown function no 0.18
    10 PP_0561 thiol/disulfide interchange protein 1 no 0.18
    11 PP_3743 conserved exported protein of unknown function no 0.17
    12 PP_0703 putative Transmembrane sensor no 0.17
    13 PP_3884 Phage holin, lambda family no 0.17
    14 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.84 0.17
    15 PP_1445 carbohydrate-selective porin no 0.17
    16 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.16
    17 PP_2003 conserved protein of unknown function no 0.16
    18 PP_4162 conserved membrane protein of unknown function no 0.16
    19 PP_4959 diguanylate cyclase 0.56 0.16
    20 PP_0355 Response regulator no 0.15

    Or look for negative cofitness