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  • Top cofit genes for PP_2912 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG00954947: hypothetical protein
    KEGG: RIO kinase 1

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0123 DNA polymerase I, 5 no 0.26
    2 PP_0823 Selenide, water dikinase no 0.23
    3 PP_5294 Ribonuclease PH 0.42 0.23
    4 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.37 0.22
    5 PP_3649 Transcriptional regulator, GntR family no 0.22
    6 PP_0489 formate dehydrogenase-O major subunit no 0.22
    7 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.49 0.22
    8 PP_4880 exoribonuclease R 0.53 0.21
    9 PP_4942 conserved protein of unknown function 0.37 0.21
    10 PP_0439 conserved protein of unknown function 0.34 0.20
    11 PP_1189 conserved hypothetical protein no 0.20
    12 PP_0951 Ribosome hibernation promoting factor 0.77 0.20
    13 PP_0498 conserved protein of unknown function no 0.20
    14 PP_2293 DNA maturase B no 0.20
    15 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.19
    16 PP_4120 NADH-quinone oxidoreductase subunit B no 0.19
    17 PP_1565 Phage portal protein, HK97 family no 0.19
    18 PP_2971 transposase no 0.19
    19 PP_0002 probable chromosome partition protein no 0.19
    20 PP_3248 Dyp-type peroxidase family protein no 0.19

    Or look for negative cofitness