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  • Top cofit genes for PP_2908 from Pseudomonas putida KT2440

    DNA-binding transcriptional repressor
    SEED: CsiR, transcriptional repressor of CsiD

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0567 Biosynthetic arginine decarboxylase no 0.39
    2 PP_4548 putative Oxidoreductase no 0.33
    3 PP_0266 Agmatine deiminase no 0.32
    4 PP_4547 putative Glutamine synthetase no 0.31
    5 PP_5262 Probable multidrug resistance protein NorM no 0.31
    6 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.43 0.30
    7 PP_2932 Amidase family protein 0.26 0.29
    8 PP_1758 putative sulfurtransferase containing rhodanese-like domain no 0.29
    9 PP_5035 Histidine utilization repressor no 0.27
    10 PP_1842 Glutamine amidotransferase, class I no 0.27
    11 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase no 0.26
    12 PP_5160 conserved exported protein of unknown function no 0.26
    13 PP_5184 glutamylpolyamine synthetase no 0.26
    14 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase no 0.25
    15 PP_4684 conserved protein of unknown function with kinase-like domain no 0.25
    16 PP_1963 conserved protein of unknown function no 0.25
    17 PP_2893 conserved exported protein of unknown function no 0.24
    18 PP_4776 AsnC family transcriptional regulator no 0.24
    19 PP_1011 glucokinase no 0.24
    20 PP_4785 conserved exported protein of unknown function no 0.24

    Or look for negative cofitness