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  • Top cofit genes for PP_2901 from Pseudomonas putida KT2440

    Acyl-homoserine lactone acylase
    SEED: Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.20
    2 PP_1573 putative Major tail protein no 0.20
    3 PP_4799 putative Muramoyltetrapeptide carboxypeptidase 0.59 0.20
    4 PP_5218 DedA family protein no 0.18
    5 PP_2871 Class II aldolase/adducin domain protein no 0.18
    6 PP_0685 conserved protein of unknown function no 0.18
    7 PP_4004 DNA translocase FtsK no 0.18
    8 PP_0691 Glutamate 5-kinase 0.32 0.18
    9 PP_2323 conserved protein of unknown function no 0.18
    10 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.58 0.17
    11 PP_1500 putative Lipoprotein 0.25 0.17
    12 PP_0346 putative Heptose kinase WapQ 0.26 0.17
    13 PP_2363 conserved protein of unknown function no 0.17
    14 PP_1003 arginine/ornithine antiporter no 0.17
    15 PP_2322 Major outer membrane lipoprotein 0.27 0.17
    16 PP_5568 conserved membrane protein of unknown function no 0.17
    17 PP_1036 membrane-bound lytic murein transglycosylase F 0.32 0.17
    18 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D no 0.16
    19 PP_5509 conserved exported protein of unknown function no 0.16
    20 PP_0333 conserved exported protein of unknown function no 0.16

    Or look for negative cofitness