Top cofit genes for PP_2889 from Pseudomonas putida KT2440

putative Transmembrane regulator PrtR
SEED: Transmembrane regulator protein PrtR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4171		conserved exported protein of unknown function	no	0.58
2	PP_1113		Pyridoxal-phosphate dependent enzyme family protein	no	0.51
3	PP_3831		conserved protein of unknown function	no	0.50
4	PP_5053		Protein-export protein SecB	no	0.49
5	PP_4373		Transcriptional regulator FleQ	0.64	0.47
6	PP_0355		Response regulator	no	0.47
7	PP_1650		Sensor protein GacS	0.87	0.47
8	PP_4099		two-componenent system BarA/UvrY - regulatory subunit	0.89	0.46
9	PP_4629		Sensory box protein	no	0.44
10	PP_2387		conserved protein of unknown function	no	0.44
11	PP_5005		Poly(3-hydroxyalkanoate) polymerase 2	no	0.42
12	PP_0574		DNA-binding response regulator, LuxR family	no	0.41
13	PP_4173		Sensor histidine kinase/response regulator	0.48	0.40
14	PP_2231		putative permease of the drug/metabolite transporter (DMT) superfamily	no	0.39
15	PP_0674		ADP/ATP ratio sensor and inhibitor of translation	0.85	0.39
16	PP_4100		Transcriptional regulator, Cro/CI family	no	0.38
17	PP_1453		putative NUDIX hydrolase with low 3-phosphohydroxypyruvate phosphatase activity	0.28	0.38
18	PP_3734		putative ABC transporter, permease protein	no	0.38
19	PP_0168		putative surface adhesion protein	no	0.37
20	PP_4390		flagellar basal-body rod protein FlgC	0.36	0.37

Or look for negative cofitness