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  • Top cofit genes for PP_2833 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1861 Transcriptional regulator, LysR family no 0.20
    2 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.17
    3 PP_2050 conserved protein of unknown function no 0.16
    4 PP_1409 ribosomal small subunit pseudouridine synthase A no 0.16
    5 PP_1301 quality control serine endoprotease DegS no 0.16
    6 PP_4982 putative cytochrome b561, iron-regulated no 0.15
    7 PP_3168 porin-like protein no 0.15
    8 PP_5624 conserved protein of unknown function no 0.15
    9 PP_3060 putative tail sheath protein no 0.14
    10 PP_t57 tRNA-Arg no 0.14
    11 PP_3249 putative oxidoreductase no 0.14
    12 PP_2406 putative quinate/shikimate dehydrogenase no 0.14
    13 PP_4330 putative toxin-related protein no 0.14
    14 PP_2847 Urease accessory protein UreJ no 0.13
    15 PP_5730 conserved protein of unknown function no 0.13
    16 PP_5261 Transcriptional regulator, LysR family no 0.13
    17 PP_2255 C4-dicarboxylate transport protein no 0.13
    18 PP_4781 Sensor histidine kinase no 0.13
    19 PP_2994 Oxidoreductase, FMN-binding no 0.13
    20 PP_2260 putative glycerol-phosphate ABC transporter, ATP-binding protein no 0.13

    Or look for negative cofitness