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  • Top cofit genes for PP_2832 from Pseudomonas putida KT2440

    galactose-binding protein regulator
    SEED: Regulatory protein, LysR:LysR, substrate-binding

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator no 0.28
    2 PP_4100 Transcriptional regulator, Cro/CI family 0.38 0.25
    3 PP_5144 conserved protein of unknown function no 0.24
    4 PP_2025 Exonuclease SbcD no 0.24
    5 PP_3831 conserved protein of unknown function no 0.24
    6 PP_1824 Smr domain protein 0.35 0.23
    7 PP_5166 Sigma-54 dependent transcriptional regulator no 0.23
    8 PP_5117 putative hydrolase no 0.23
    9 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.22
    10 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase 0.38 0.21
    11 PP_4171 conserved exported protein of unknown function no 0.21
    12 PP_4542 putative ABC transporter, ATP-binding protein/permease protein no 0.21
    13 PP_0737 lipid A 3-O-deacylase 0.43 0.21
    14 PP_0994 putative RNA polymerase sigma factor no 0.21
    15 PP_5651 conserved protein of unknown function no 0.21
    16 PP_0208 putative Nitrate ABC transporter, permease protein no 0.20
    17 PP_3088 conserved protein of unknown function no 0.20
    18 PP_3974 Transcriptional regulator, LysR family no 0.20
    19 PP_1124 conserved membrane protein of unknown function no 0.20
    20 PP_t29 tRNA-Ala no 0.20

    Or look for negative cofitness