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  • Top cofit genes for PP_2826 from Pseudomonas putida KT2440

    Transcriptional regulator MexT
    SEED: Transcriptional regulator MexT

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4160 K+ transporting ATPase, KdpB subunit 0.41 0.18
    2 PP_4412 conserved protein of unknown function no 0.17
    3 PP_3426 Multidrug efflux RND transporter MexF 0.93 0.16
    4 PP_2506 conserved membrane protein of unknown function no 0.16
    5 PP_1946 Oxidoreductase, short chain dehydrogenase/reductase family no 0.15
    6 PP_5340 Acetylpolyamine aminohydrolase no 0.15
    7 PP_2500 conserved protein of unknown function no 0.15
    8 PP_4693 RNA polymerase-binding transcription factor DksA 0.15 0.14
    9 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.14
    10 PP_1190 conserved protein of unknown function no 0.14
    11 PP_4454 putative Opine ABC transporter, permease protein no 0.14
    12 PP_1631 conserved protein of unknown function no 0.14
    13 PP_3763 putative CobF protein no 0.14
    14 PP_3386 type 6 secretion system protein no 0.14
    15 PP_4312 conserved exported protein of unknown function no 0.14
    16 PP_4445 transposase no 0.14
    17 PP_2879 conserved exported protein of unknown function no 0.14
    18 PP_3943 N-formylmaleamate deformylase no 0.13
    19 PP_4452 NAD/NADP octopine/nopaline dehydrogenase family protein no 0.13
    20 PP_1056 putative Iron-chelator utilization protein no 0.13

    Or look for negative cofitness