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  • Top cofit genes for PP_2806 from Pseudomonas putida KT2440

    Transcriptional regulator, TetR family
    SEED: Transcriptional regulator, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1941 conserved protein of unknown function no 0.43
    2 PP_0368 putative Acyl-CoA dehydrogenase no 0.38
    3 PP_0413 Polyamine ABC transporter, permease protein no 0.37
    4 PP_3649 Transcriptional regulator, GntR family no 0.34
    5 PP_4131 NADH-quinone oxidoreductase subunit N no 0.33
    6 PP_1942 Transcriptional regulator, LysR family no 0.33
    7 PP_2019 adhesin-associated MmpL efflux pump (from data) no 0.33
    8 PP_3603 Transcriptional regulator, GntR family no 0.32
    9 PP_4124 NADH-quinone oxidoreductase subunit G no 0.31
    10 PP_4121 NADH-quinone oxidoreductase subunit C/D no 0.31
    11 PP_4120 NADH-quinone oxidoreductase subunit B no 0.30
    12 PP_0938 conserved protein of unknown function no 0.30
    13 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L no 0.30
    14 PP_3474 putative Curli fiber protein CsgE no 0.29
    15 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E no 0.29
    16 PP_4817 MaoC domain protein no 0.29
    17 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase no 0.29
    18 PP_3925 conserved protein of unknown function no 0.28
    19 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis no 0.28
    20 PP_2436 Transcriptional regulator, LysR family no 0.27

    Or look for negative cofitness