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  • Top cofit genes for PP_2794 from Pseudomonas putida KT2440

    Oxidoreductase, short chain dehydrogenase/reductase family
    SEED: Short-chain dehydrogenase/reductase SDR

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2790 Sigma-54 dependent sensory box protein no 0.57
    2 PP_2791 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) 0.42 0.54
    3 PP_3753 Transcriptional regulator, AraC family no 0.48
    4 PP_3754 Beta-ketothiolase BktB 0.34 0.47
    5 PP_2333 GntR family transcriptional regulator no 0.41
    6 PP_2793 Acyl-CoA dehydrogenase family protein no 0.36
    7 PP_3755 3-hydroxybutyryl-CoA dehydrogenase no 0.35
    8 PP_3286 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) no 0.29
    9 PP_4628 conserved protein of unknown function 0.20 0.26
    10 PP_2334 2-methylisocitrate lyase no 0.25
    11 PP_5210 Alcohol dehydrogenase, zinc-containing no 0.25
    12 PP_2335 methylcitrate synthase no 0.24
    13 PP_2337 aconitate isomerase no 0.22
    14 PP_3925 conserved protein of unknown function no 0.19
    15 PP_3121 transcriptional regulator, LysR family no 0.18
    16 PP_2336 aconitate hydratase 1 no 0.18
    17 PP_2795 AMP-binding domain protein 0.18 0.18
    18 PP_2542 Transcriptional regulator, GntR family no 0.18
    19 PP_2082 phosphoenolpyruvate synthetase 0.38 0.17
    20 PP_3049 conserved protein of unknown function no 0.17

    Or look for negative cofitness