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  • Top cofit genes for PP_2784 from Pseudomonas putida KT2440

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5558 putative transcriptional xre family of phage origin no 0.21
    2 PP_1051 Type II secretion pathway protein XcpV no 0.18
    3 PP_4211 outer membrane pyoverdine efflux protein no 0.18
    4 PP_5176 conserved protein of unknown function no 0.17
    5 PP_0626 NADH dehydrogenase no 0.16
    6 PP_4494 putative LysR-type transcriptional activator protein no 0.16
    7 PP_1727 Transcriptional regulator, GntR family no 0.15
    8 PP_2776 Homocysteine S-methyltransferase family protein no 0.15
    9 PP_5561 conserved protein of unknown function no 0.15
    10 PP_2185 putative Formate dehydrogenase, alpha subunit no 0.14
    11 PP_4392 chemotaxis protein methyltransferase 0.21 0.14
    12 PP_1235 AhpC/TSA family protein no 0.14
    13 PP_2995 putative DNA topology modulation kinase FlaR no 0.14
    14 PP_3000 MaoC domain protein no 0.14
    15 PP_1893 medium-long chain acyl-CoA dehydrogenase no 0.13
    16 PP_2054 putative DNA-binding transcriptional regulator no 0.13
    17 PP_1930 arsenic resistance transcriptional regulator no 0.13
    18 PP_1812 conserved protein of unknown function no 0.13
    19 PP_5543 protein of unknown function no 0.13
    20 PP_0141 putative ABC transporter, ATP-binding protein no 0.13

    Or look for negative cofitness