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  • Top cofit genes for PP_2701 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2703 major facilitator transporter no 0.36
    2 PP_2704 Peptidase, M20/M25/M40 family no 0.31
    3 PP_0988 glycine dehydrogenase no 0.28
    4 PP_1127 Carboxylesterase no 0.27
    5 PP_0997 Sigma-54 dependent transcriptional regulator/sensory box protein no 0.23
    6 PP_0989 glycine cleavage system H protein 1 no 0.19
    7 PP_1128 OmpA family protein no 0.18
    8 PP_0830 Acetyltransferase, GNAT family no 0.18
    9 PP_2261 Sugar ABC transporter, ATP-binding protein no 0.17
    10 PP_0986 aminomethyltransferase no 0.17
    11 PP_5153 putative isomerase/hydrolase no 0.16
    12 PP_3988 conserved protein of unknown function no 0.16
    13 PP_4676 methionine sulfoxide reductase catalytic subunit no 0.16
    14 PP_5377 conserved hypothetical protein no 0.16
    15 PP_1629 Protein RecA no 0.16
    16 PP_0160 putative ferrioxamine receptor no 0.15
    17 PP_2805 FAD-containing monooxygenase EthA no 0.15
    18 PP_2210 LysR family transcriptional regulator no 0.15
    19 PP_0663 Transcriptional regulator, AsnC family no 0.15
    20 PP_0574 DNA-binding response regulator, LuxR family no 0.15

    Or look for negative cofitness