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  • Top cofit genes for PP_2696 from Pseudomonas putida KT2440

    DNA-binding transcriptional regulator, homocysteine-binding
    SEED: Transcriptional activator MetR

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0138 conserved membrane protein of unknown function no 0.18
    2 PP_0924 conserved protein of unknown function no 0.18
    3 PP_2009 putative 1-aminocyclopropane-1-carboxylate deaminase no 0.18
    4 PP_2375 cobalamin-dependent methionine synthase no 0.16
    5 PP_5203 5-formyltetrahydrofolate cyclo-ligase no 0.16
    6 PP_1346 Glutamate N-acetyltransferase/Amino-acid acetyltransferase 0.86 0.16
    7 PP_2197 conserved exported protein of unknown function no 0.16
    8 PP_3242 GGDEF domain protein no 0.16
    9 PP_3455 Multidrug efflux RND membrane fusion protein no 0.16
    10 PP_4696 Nitrogen regulation protein NR(I) no 0.15
    11 PP_4785 conserved exported protein of unknown function no 0.15
    12 PP_1534 conserved protein of unknown function no 0.15
    13 PP_4977 5,10-methylenetetrahydrofolate reductase 0.98 0.15
    14 PP_2078 transcriptional activator protein LysR 0.93 0.15
    15 PP_2344 conserved protein of unknown function no 0.15
    16 PP_0532 conserved exported protein of unknown function no 0.15
    17 PP_3107 conserved protein of unknown function no 0.15
    18 PP_2946 peptidyl-tRNA hydrolase, ribosome rescue factor no 0.14
    19 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase no 0.14
    20 PP_2364 conserved protein of unknown function no 0.14

    Or look for negative cofitness