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  • Top cofit genes for PP_2676 from Pseudomonas putida KT2440

    putative Periplasmic binding protein
    SEED: amino acid ABC transporter, periplasmic substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5538 putative ABC transporter, substrate-binding protein 0.84 0.51
    2 PP_2679 quinoprotein ethanol dehydrogenase 0.77 0.50
    3 PP_2667 ABC transporter 0.76 0.50
    4 PP_2675 Cytochrome c-type protein 0.70 0.44
    5 PP_0381 Coenzyme PQQ synthesis protein F 0.71 0.40
    6 PP_2669 putative Outer membrane protein 0.82 0.39
    7 PP_0376 Coenzyme PQQ synthesis protein E 0.75 0.38
    8 PP_0378 Pyrroloquinoline-quinone synthase 0.70 0.36
    9 PP_0379 Coenzyme PQQ synthesis protein B 0.73 0.35
    10 PP_2674 quinoprotein ethanol dehydrogenase 0.69 0.34
    11 PP_2682 Fe-containing alcohol dehydrogenase 0.66 0.33
    12 PP_2665 Glycerol metabolism activator 0.67 0.31
    13 PP_2668 ABC efflux transporter, ATP-binding protein 0.78 0.29
    14 PP_2671 Sensor histidine kinase 0.39 0.26
    15 PP_3459 quinohemoprotein amine dehydrogenase, beta subunit no 0.26
    16 PP_2672 Transcriptional activator protein ExaE 0.64 0.26
    17 PP_0380 Coenzyme PQQ synthesis protein A 0.20 0.25
    18 PP_2664 putative hybrid sensor and regulator, histidine kinase no 0.24
    19 PP_4320 cytochrome c-type biogenesis protein 0.40 0.23
    20 PP_3458 Butyrate--CoA ligase no 0.22

    Or look for negative cofitness