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  • Top cofit genes for PP_2672 from Pseudomonas putida KT2440

    Transcriptional activator protein ExaE
    SEED: DNA-binding response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2674 quinoprotein ethanol dehydrogenase 0.91 0.54
    2 PP_2671 Sensor histidine kinase 0.74 0.54
    3 PP_2665 Glycerol metabolism activator 0.88 0.35
    4 PP_2675 Cytochrome c-type protein 0.87 0.34
    5 PP_0376 Coenzyme PQQ synthesis protein E 0.79 0.32
    6 PP_0381 Coenzyme PQQ synthesis protein F 0.81 0.31
    7 PP_2682 Fe-containing alcohol dehydrogenase 0.78 0.29
    8 PP_0378 Pyrroloquinoline-quinone synthase 0.83 0.29
    9 PP_0379 Coenzyme PQQ synthesis protein B 0.75 0.27
    10 PP_2676 putative Periplasmic binding protein 0.64 0.26
    11 PP_5748 cytochrome c heme lyase subunit no 0.25
    12 PP_0380 Coenzyme PQQ synthesis protein A 0.18 0.23
    13 PP_2664 putative hybrid sensor and regulator, histidine kinase no 0.22
    14 PP_2666 conserved exported protein of unknown function 0.86 0.21
    15 PP_0377 coenzyme PQQ synthesis protein D 0.78 0.20
    16 PP_5538 putative ABC transporter, substrate-binding protein 0.47 0.20
    17 PP_2667 ABC transporter 0.67 0.19
    18 PP_2679 quinoprotein ethanol dehydrogenase 0.55 0.19
    19 PP_2662 conserved exported protein of unknown function 0.71 0.18
    20 PP_2669 putative Outer membrane protein 0.61 0.16

    Or look for negative cofitness