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  • Top cofit genes for PP_2667 from Pseudomonas putida KT2440

    ABC transporter
    SEED: ABC transporter permease protein
    KEGG: antibiotic transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2679 quinoprotein ethanol dehydrogenase 0.86 0.61
    2 PP_5538 putative ABC transporter, substrate-binding protein 0.84 0.61
    3 PP_2669 putative Outer membrane protein 0.92 0.59
    4 PP_2675 Cytochrome c-type protein 0.74 0.55
    5 PP_0381 Coenzyme PQQ synthesis protein F 0.79 0.55
    6 PP_0376 Coenzyme PQQ synthesis protein E 0.79 0.53
    7 PP_0378 Pyrroloquinoline-quinone synthase 0.79 0.52
    8 PP_2676 putative Periplasmic binding protein 0.76 0.50
    9 PP_0379 Coenzyme PQQ synthesis protein B 0.79 0.45
    10 PP_2682 Fe-containing alcohol dehydrogenase 0.73 0.39
    11 PP_2665 Glycerol metabolism activator 0.64 0.38
    12 PP_4063 putative Long-chain-fatty-acid-CoA ligase no 0.36
    13 PP_0377 coenzyme PQQ synthesis protein D 0.58 0.34
    14 PP_3459 quinohemoprotein amine dehydrogenase, beta subunit no 0.34
    15 PP_2668 ABC efflux transporter, ATP-binding protein 0.81 0.30
    16 PP_4065 methylcrotonyl-CoA carboxylase biotin-containing subunit beta 0.25 0.30
    17 PP_0380 Coenzyme PQQ synthesis protein A 0.35 0.30
    18 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha no 0.28
    19 PP_4064 isovaleryl-CoA dehydrogenase 0.30 0.28
    20 PP_5748 cytochrome c heme lyase subunit no 0.26

    Or look for negative cofitness