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  • Top cofit genes for PP_2652 from Pseudomonas putida KT2440

    putative Hydratase/decarboxylase
    SEED: 2-keto-4-pentenoate hydratase (EC 4.2.1.80)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.33
    2 PP_3786 aminotransferase no 0.24
    3 PP_3376 putative phosphonate dehydrogenase no 0.24
    4 PP_3790 diaminopimelate epimerase no 0.24
    5 PP_4684 conserved protein of unknown function with kinase-like domain no 0.23
    6 PP_0506 putative ABC efflux transporter, permease protein no 0.23
    7 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.23
    8 PP_3788 putative Non-ribosomal peptide synthetase no 0.23
    9 PP_0718 Sulfate transporter no 0.23
    10 PP_2712 conserved exported protein of unknown function no 0.23
    11 PP_5435 conserved protein of unknown function no 0.23
    12 PP_3787 conserved protein of unknown function no 0.22
    13 PP_1009 glyceraldehyde-3-phosphate dehydrogenase no 0.22
    14 PP_5733 putative metal-binding protein no 0.21
    15 PP_0120 putative zinc ABC transporter no 0.21
    16 PP_0491 formate dehydrogenase-O, gamma subunit no 0.21
    17 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator no 0.21
    18 PP_3784 conserved protein of unknown function no 0.21
    19 PP_0172 ABC transporter, permease protein no 0.20
    20 PP_1253 Transcriptional regulator, ArsR family no 0.20

    Or look for negative cofitness