Top cofit genes for PP_2647 from Pseudomonas putida KT2440

Major facilitator family transporter
SEED: Transcription regulatory protein opdE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3362		Transcriptional regulator, AsnC family	no	0.21
2	PP_2210		LysR family transcriptional regulator	no	0.20
3	PP_3720		putative NAD(P)H quinone oxidoreductase	no	0.19
4	PP_2870		putative spermidine/putrescine-binding periplasmic protein	no	0.18
5	PP_0355		Response regulator	no	0.18
6	PP_3719		Putrescine-binding periplasmic protein	no	0.18
7	PP_1755		fumarate hydratase (class 2)	no	0.17
8	PP_0632		leader peptidase/N-methyltransferase	0.53	0.17
9	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	no	0.17
10	PP_1718		putative diguanylate phosphodiesterase containing EAL domain	no	0.17
11	PP_0534		putative Transcriptional regulator PfeR	no	0.17
12	PP_2408		cobalt-zinc-cadmium resistance protein	no	0.17
13	PP_1819		Methyl-accepting chemotaxis transducer	no	0.16
14	PP_5230		Tyrosine recombinase XerC	no	0.16
15	PP_0281		Amino acid ABC transporter, permease protein	no	0.16
16	PP_2090		Uroporphyrinogen-III C-methyltransferase	0.20	0.16
17	PP_2694		Aldehyde dehydrogenase family protein	no	0.16
18	PP_1445		carbohydrate-selective porin	no	0.16
19	PP_5249		Transcriptional regulator, LysR family	no	0.15
20	PP_1998		putative cell division protein	no	0.15

Or look for negative cofitness