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  • Top cofit genes for PP_2621 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Protein ImpG/VasA
    KEGG: type VI secretion system protein ImpG

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2220 C4-type zinc finger protein, DksA/TraR family no 0.21
    2 PP_5569 protein of unknown function of phage origin no 0.18
    3 PP_4690 Rieske 2Fe-2S family protein no 0.18
    4 PP_5328 putative phosphate transport system permease protein no 0.17
    5 PP_4212 pyoverdine biosynthesis related protein no 0.17
    6 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.16
    7 PP_0264 Sensor histidine kinase no 0.16
    8 PP_1028 Transcriptional regulator, LysR family no 0.15
    9 PP_4286 allantoinase 0.33 0.15
    10 PP_4595 putative LRP-like transcriptional regulator no 0.15
    11 PP_4683 transglycosylase/transpeptidase no 0.15
    12 PP_0489 formate dehydrogenase-O major subunit 0.41 0.14
    13 PP_2755 sulfur acquisition oxidoreductase, SfnB family no 0.14
    14 PP_1060 putative Glutamate synthase, large subunit no 0.14
    15 PP_4583 putative Peptidase no 0.14
    16 PP_1224 periplasmic subunit of the TolQRA transport system no 0.14
    17 PP_4942 conserved protein of unknown function no 0.14
    18 PP_5742 putative membrane protein of unknown function no 0.14
    19 PP_2257 putative aerotaxis receptor no 0.14
    20 PP_3160 conserved protein of unknown function no 0.14

    Or look for negative cofitness