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  • Top cofit genes for PP_2616 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2769 putative Branched-chain amino acid ABC transporter, permease protein no 0.19
    2 PP_3073 3-hydroxybutyrate dehydrogenase 0.22 0.19
    3 PP_0401 Ribosomal RNA small subunit methyltransferase A no 0.19
    4 PP_2483 conserved protein of unknown function no 0.19
    5 PP_3304 Multidrug resistance transporter, Bcr/CflA family no 0.18
    6 PP_0691 Glutamate 5-kinase no 0.18
    7 PP_0990 DoxX family protein no 0.18
    8 PP_4575 Urea amidolyase-related protein no 0.18
    9 PP_2500 conserved protein of unknown function no 0.18
    10 PP_2475 Transcriptional regulator, TetR family no 0.17
    11 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB no 0.17
    12 PP_0856 conserved lipoprotein of unknown function 0.32 0.17
    13 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.52 0.17
    14 PP_4942 conserved protein of unknown function no 0.17
    15 PP_3307 conserved protein of unknown function no 0.16
    16 PP_0998 conserved protein of unknown function no 0.16
    17 PP_2810 conserved exported protein of unknown function no 0.16
    18 PP_0632 leader peptidase/N-methyltransferase no 0.16
    19 PP_2567 Hydrolase, alpha/beta fold family no 0.16
    20 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex no 0.16

    Or look for negative cofitness