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  • Top cofit genes for PP_2615 from Pseudomonas putida KT2440

    hemolysin-coregulated protein
    SEED: Hcp
    KEGG: type VI secretion system secreted protein Hcp

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5457 conserved protein of unknown function no 0.15
    2 PP_1951 Oxidoreductase, short chain dehydrogenase/reductase family no 0.13
    3 PP_0939 Carbon-nitrogen hydrolase family protein no 0.13
    4 PP_2999 Glyoxalase family protein no 0.13
    5 PP_4458 putative Opine ABC transporter, periplasmic binding protein no 0.12
    6 PP_4225 two component system DNA-binding transcriptional activator QseB 0.45 0.12
    7 PP_1892 conserved protein of unknown function no 0.11
    8 PP_0363 8-amino-7-oxononanoate synthase no 0.11
    9 PP_1477 ssDNA-specific exonuclease RecJ no 0.11
    10 PP_2657 phosphate ABC transporter no 0.10
    11 PP_0851 Type IV pili biogenesis protein PilF 0.37 0.10
    12 PP_4411 conserved protein of unknown function no 0.10
    13 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase no 0.10
    14 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily no 0.10
    15 PP_2370 conserved protein of unknown function no 0.10
    16 PP_3748 conserved hypothetical protein no 0.10
    17 PP_0366 dethiobiotin synthetase no 0.10
    18 PP_5331 Long-chain acyl-CoA thioester hydrolase no 0.10
    19 PP_0628 conserved protein of unknown function no 0.10
    20 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.67 0.10

    Or look for negative cofitness