Top cofit genes for PP_2553 from Pseudomonas putida KT2440

Major facilitator family transporter
SEED: L-Proline/Glycine betaine transporter ProP

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2554		putative 3-dehydroshikimate dehydratase	0.32	0.44
2	PP_2406		putative quinate/shikimate dehydrogenase	0.19	0.25
3	PP_1377		beta-ketoadipyl-CoA thiolase	no	0.22
4	PP_1378		alpha-ketoglutarate permease	no	0.22
5	PP_3952		3-oxoadipate CoA-transferase subunit A	0.19	0.21
6	PP_4363		Sensor histidine kinase/response regulator	no	0.21
7	PP_1380		3-oxoadipate enol-lactonase 2	no	0.20
8	PP_1713		Transcriptional regulator PcaQ	no	0.19
9	PP_3733		putative ABC transporter lipoprotein	no	0.19
10	PP_3951		3-oxoadipate CoA-transferase subunit A	0.18	0.19
11	PP_2604		major facilitator family transporter	no	0.18
12	PP_5322		putative metal ion transporter	0.22	0.18
13	PP_1381		4-carboxymuconolactone decarboxylase	no	0.18
14	PP_1379		3-carboxy-cis,cis-muconate cycloisomerase	no	0.18
15	PP_4656		protocatechuate 3,4-dioxygenase beta chain	0.34	0.17
16	PP_4655		protocatechuate 3,4-dioxygenase alpha chain	0.32	0.16
17	PP_1896		putative ABC transporter - permease subunit	0.34	0.16
18	PP_4011		isocitrate dehydrogenase, NADP(+)-specific	no	0.15
19	PP_5713		conserved protein of unknown function	no	0.15
20	PP_2894		conserved protein of unknown function	no	0.15

Or look for negative cofitness