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  • Top cofit genes for PP_2552 from Pseudomonas putida KT2440

    DOPA decarboxylase
    SEED: Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)
    KEGG: aromatic-L-amino-acid decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2551 Transcriptional regulator, LysR family no 0.35
    2 PP_3157 Inositol monophosphatase family protein no 0.29
    3 PP_2550 putative transcriptional regulatory protein no 0.29
    4 PP_1420 Transcriptional regulatory protein tctD no 0.20
    5 PP_1418 putative Tricarboxylate transport protein TctC 0.30 0.20
    6 PP_1421 putative Sensor histidine kinase TctE no 0.19
    7 PP_0273 conserved protein of unknown function no 0.17
    8 PP_5086 putative nuclease (SNase domain protein) no 0.17
    9 PP_0960 phospholipid ABC transporter binding protein no 0.16
    10 PP_1748 conserved protein of unknown function no 0.16
    11 PP_3578 phosphoglucomutase no 0.16
    12 PP_3634 putative acetyltransferase, GNAT family no 0.16
    13 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.16
    14 PP_2090 Uroporphyrinogen-III C-methyltransferase no 0.15
    15 PP_4052 4-alpha-glucanotransferase no 0.15
    16 PP_0725 conserved hypothetical TPR repeat protein no 0.15
    17 PP_0876 Transcriptional regulator, AraC family no 0.15
    18 PP_5519 conserved protein of unknown function of phage origin no 0.15
    19 PP_2814 conserved protein of unknown function no 0.15
    20 PP_0147 Citrate transporter 0.20 0.15

    Or look for negative cofitness