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  • Top cofit genes for PP_2545 from Pseudomonas putida KT2440

    trans-aconitate methyltransferase
    SEED: Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
    KEGG: trans-aconitate 2-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0354 CBS domain protein 0.25 0.53
    2 PP_4001 Putative fluoride ion transporter CrcB no 0.43
    3 PP_0353 Exonuclease no 0.41
    4 PP_4951 Drug resistance transporter, EmrB/QacA family no 0.29
    5 PP_4975 Long-chain acyl-CoA thioester hydrolase family protein no 0.26
    6 PP_0970 Cyanate MFS transporter no 0.23
    7 PP_3420 Sensor histidine kinase no 0.22
    8 PP_2724 conserved protein of unknown function no 0.19
    9 PP_0380 Coenzyme PQQ synthesis protein A no 0.18
    10 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase 0.31 0.17
    11 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB 0.69 0.17
    12 PP_3761 Sensor histidine kinase/response regulator no 0.17
    13 PP_3744 transcriptional dual regulator GlcC-Glycolate no 0.17
    14 PP_1968 TetR family transcriptional regulator no 0.17
    15 PP_0355 Response regulator no 0.17
    16 PP_0743 conserved protein with NAD(P)-binding Rossmann-fold domain 0.17 0.17
    17 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat no 0.16
    18 PP_4999 dihydroorotase-like protein no 0.16
    19 PP_0379 Coenzyme PQQ synthesis protein B no 0.16
    20 PP_2870 putative spermidine/putrescine-binding periplasmic protein no 0.16

    Or look for negative cofitness