Top cofit genes for PP_2539 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3955		permease	no	0.18
2	PP_2536		Glutathione S-transferase family protein	no	0.17
3	PP_3226		Acyl-CoA dehydrogenase-related protein	no	0.16
4	PP_5136		ABC transporter, permease protein	no	0.16
5	PP_4196		conserved exported protein of unknown function	no	0.15
6	PP_2885		putative Transporter	no	0.15
7	PP_5276		Phospholipase D family protein	no	0.15
8	PP_0886		conserved exported protein of unknown function	no	0.15
9	PP_1275		conserved protein of unknown function	no	0.14
10	PP_4220		non-ribosomal peptide synthetase (subunit of ferribactin synthase)	no	0.14
11	PP_4974		NhaP-type Na+/H+ and K+/H+ antiporters	no	0.14
12	PP_2842		urease accessory protein	no	0.14
13	PP_3725		putative Acyl-CoA dehydrogenase	no	0.14
14	PP_2193		Outer membrane ferric siderophore receptor	no	0.14
15	PP_4645		Large-conductance mechanosensitive channel	no	0.14
16	PP_0892		Phospholipase family protein	no	0.14
17	PP_1326		16S rRNA 2'-O-ribose C1402 methyltransferase	no	0.14
18	PP_1051		Type II secretion pathway protein XcpV	no	0.14
19	PP_0315		putative glycine-betaine dioxygenase subunit	no	0.13
20	PP_4080		conserved protein of unknown function	no	0.13

Or look for negative cofitness