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  • Top cofit genes for PP_2516 from Pseudomonas putida KT2440

    HTH-type transcriptional regulator GalR
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1718 putative diguanylate phosphodiesterase containing EAL domain no 0.19
    2 PP_3755 3-hydroxybutyryl-CoA dehydrogenase no 0.17
    3 PP_4345 Transcriptional regulator, GntR family no 0.17
    4 PP_2856 conserved exported protein of unknown function no 0.16
    5 PP_2280 conserved protein of unknown function no 0.16
    6 PP_2293 DNA maturase B no 0.16
    7 PP_0711 putative hydrolase no 0.16
    8 PP_0647 conserved membrane protein of unknown function no 0.15
    9 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.15
    10 PP_2077 diaminopimelate decarboxylase no 0.15
    11 PP_3816 Polyamine ABC transporter, permease protein 0.45 0.14
    12 PP_0181 conserved protein of unknown function no 0.14
    13 PP_0022 hypothetical protein no 0.14
    14 PP_4207 conserved protein of unknown function no 0.14
    15 PP_0080 conserved protein of unknown function no 0.14
    16 PP_1557 conserved protein of unknown function no 0.14
    17 PP_3160 conserved protein of unknown function no 0.13
    18 PP_4335 flagellar motor protein no 0.13
    19 PP_3530 putative S-ureidoglycine aminohydrolase 0.25 0.13
    20 PP_3992 xanthine permease 0.20 0.13

    Or look for negative cofitness