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  • Top cofit genes for PP_2515 from Pseudomonas putida KT2440

    4-oxalmesaconate hydratase
    SEED: 4-oxalmesaconate hydratase (EC 4.2.1.83)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4218 Lipase/esterase family protein no 0.22
    2 PP_0536 conserved protein of unknown function no 0.22
    3 PP_5227 diaminopimelate decarboxylase no 0.21
    4 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase no 0.20
    5 PP_3417 D-gluconate transporter no 0.20
    6 PP_5639 conserved exported protein of unknown function no 0.20
    7 PP_0364 pimeloyl-[acp] methyl ester esterase no 0.19
    8 PP_1022 glucose 6-phosphate-1-dehydrogenase no 0.19
    9 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase no 0.19
    10 PP_2782 Pyridoxalphosphate dependent aminotransferase, class III no 0.19
    11 PP_0363 8-amino-7-oxononanoate synthase no 0.18
    12 PP_3699 conserved protein of unknown function no 0.18
    13 PP_5346 pyruvate carboxylase subunit B no 0.18
    14 PP_0918 putative 3-beta hydroxysteroid dehydrogenase/isomerase family protein no 0.18
    15 PP_5347 pyruvate carboxylase subunit A no 0.17
    16 PP_4099 two-componenent system BarA/UvrY - regulatory subunit no 0.17
    17 PP_0138 conserved membrane protein of unknown function no 0.17
    18 PP_0083 tryptophan synthase beta chain 0.91 0.17
    19 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.17
    20 PP_0082 tryptophan synthase alpha chain 0.91 0.17

    Or look for negative cofitness