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  • Top cofit genes for PP_2498 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2714 Sensor histidine kinase no 0.25
    2 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.24
    3 PP_5484 protein of unknown function no 0.20
    4 PP_4429 Transcriptional regulator, GntR family no 0.20
    5 PP_4461 Major facilitator family transporter no 0.19
    6 PP_4434 D-amino acid dehydrogenase 1 small subunit no 0.18
    7 PP_4459 transposase no 0.18
    8 PP_0636 Cold shock DNA-binding domain protein no 0.18
    9 PP_3788 putative Non-ribosomal peptide synthetase no 0.18
    10 PP_1955 Cytochrome P450 family protein no 0.18
    11 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein no 0.18
    12 PP_1017 mannose/glucose ABC transporter, permease protein no 0.17
    13 PP_t64 tRNA-Gly no 0.17
    14 PP_2187 Universal stress protein family 0.34 0.17
    15 PP_1011 glucokinase no 0.17
    16 PP_1012 DNA-binding response regulator no 0.17
    17 PP_0892 Phospholipase family protein no 0.17
    18 PP_2348 Sensor histidine kinase no 0.17
    19 PP_0893 ThiJ/PfpI family protein no 0.17
    20 PP_3108 Rhs-related protein no 0.17

    Or look for negative cofitness