Top cofit genes for PP_2475 from Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0123		DNA polymerase I, 5	no	0.48
2	PP_0063		putative Lipid A biosynthesis lauroyl acyltransferase	no	0.40
3	PP_4722		Transcription elongation factor GreA	0.27	0.40
4	PP_4880		exoribonuclease R	0.86	0.39
5	PP_3819		glutathione reductase (NADPH)	0.89	0.37
6	PP_1629		Protein RecA	0.68	0.37
7	PP_4124		NADH-quinone oxidoreductase subunit G	0.93	0.35
8	PP_4988		signal transduction histidine kinase CheA/CheY-like receiver	no	0.35
9	PP_4129		NADH:ubiquinone oxidoreductase, membrane subunit L	0.92	0.35
10	PP_5310		junction-specific ATP-dependent DNA helicase	0.78	0.35
11	PP_1206		basic-amino-acid specific porin OprD	0.31	0.34
12	PP_2223		conserved protein of unknown function	0.70	0.34
13	PP_4546		ATP-dependent helicase HrpA	no	0.34
14	PP_3649		Transcriptional regulator, GntR family	0.44	0.34
15	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.63	0.33
16	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	0.72	0.32
17	PP_4121		NADH-quinone oxidoreductase subunit C/D	0.92	0.32
18	PP_4900		epoxyqueuosine reductase	0.50	0.32
19	PP_2302		DNA-binding, ATP-dependent protease	0.43	0.32
20	PP_0674		ADP/ATP ratio sensor and inhibitor of translation	0.28	0.32

Or look for negative cofitness