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  • Top cofit genes for PP_2472 from Pseudomonas putida KT2440

    putative transcriptional regulator, MerR family
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4722 Transcription elongation factor GreA no 0.35
    2 PP_5721 conserved protein of unknown function 0.93 0.32
    3 PP_0123 DNA polymerase I, 5 0.42 0.30
    4 PP_1362 pyruvate kinase II 0.23 0.29
    5 PP_4939 conserved protein of unknown function no 0.29
    6 PP_1320 stringent starvation protein A 0.55 0.28
    7 PP_4710 tRNA pseudouridine 55 synthase 0.32 0.28
    8 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.76 0.26
    9 PP_4880 exoribonuclease R 0.67 0.26
    10 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.69 0.26
    11 PP_3649 Transcriptional regulator, GntR family no 0.26
    12 PP_1994 tRNA pseudouridine (38-40)synthase 0.68 0.26
    13 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.26
    14 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.51 0.26
    15 PP_4943 putative Glycosyl transferase 0.72 0.26
    16 PP_4824 Sensor histidine kinase/response regulator no 0.26
    17 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.54 0.25
    18 PP_0003 16S RNA methyltransferase 0.68 0.25
    19 PP_3957 choline/carnitine/betaine transporter BetTC no 0.25
    20 PP_0496 Sodium/alanine symporter 0.33 0.25

    Or look for negative cofitness