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  • Top cofit genes for PP_2458 from Pseudomonas putida KT2440

    ribokinase
    SEED: Ribokinase (EC 2.7.1.15)
    KEGG: ribokinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2457 DNA-binding transcriptional repressor 0.84 0.38
    2 PP_4050 glycogen synthase 0.51 0.36
    3 PP_2144 Transcriptional regulator, TetR family 0.22 0.31
    4 PP_2889 putative Transmembrane regulator PrtR 0.24 0.31
    5 PP_2387 conserved protein of unknown function no 0.29
    6 PP_2455 ribose ABC transporter - ATP-binding subunit 0.86 0.28
    7 PP_t29 tRNA-Ala no 0.28
    8 PP_1761 diguanylate cyclase with phosphodiesterase domain no 0.27
    9 PP_5053 Protein-export protein SecB 0.66 0.26
    10 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.26
    11 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.69 0.26
    12 PP_4171 conserved exported protein of unknown function no 0.25
    13 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.84 0.25
    14 PP_4994 conserved protein of unknown function no 0.24
    15 PP_3578 phosphoglucomutase 0.54 0.24
    16 PP_4052 4-alpha-glucanotransferase 0.30 0.23
    17 PP_0355 Response regulator no 0.23
    18 PP_1908 putative Peptidase no 0.23
    19 PP_4055 Glycogen debranching enzyme 0.38 0.23
    20 PP_4785 conserved exported protein of unknown function no 0.23

    Or look for negative cofitness