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  • Top cofit genes for PP_2444 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0962 toluene-tolerance protein no 0.20
    2 PP_0961 toluene tolerance protein no 0.18
    3 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D 0.38 0.17
    4 PP_4133 Transcriptional regulator-related protein no 0.17
    5 PP_1000 ornithine carbamoyltransferase, catabolic no 0.17
    6 PP_2163 VacJ lipoprotein 0.43 0.16
    7 PP_0960 phospholipid ABC transporter binding protein 0.42 0.16
    8 PP_4027 conserved protein of unknown function no 0.16
    9 PP_1663 conserved exported protein of unknown function 0.15 0.16
    10 PP_5053 Protein-export protein SecB no 0.16
    11 PP_4171 conserved exported protein of unknown function 0.65 0.16
    12 PP_1078 putative ABC transporter, ATP-binding protein no 0.16
    13 PP_3835 Sensory box histidine kinase no 0.16
    14 PP_0346 putative Heptose kinase WapQ 0.18 0.16
    15 PP_0958 phospholipid ABC transporter ATP-binding subunit no 0.15
    16 PP_3698 conserved protein of unknown function no 0.15
    17 PP_2210 LysR family transcriptional regulator no 0.15
    18 PP_0959 phospholipid ABC transporter no 0.15
    19 PP_4262 Cytochrome oxidase maturation protein, cbb3-type 0.29 0.15
    20 PP_0227 periplasmic cystine-binding protein no 0.14

    Or look for negative cofitness