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  • Top cofit genes for PP_2439 from Pseudomonas putida KT2440

    peroxiredoxin, alkylhydroperoxide reductase - small subunit
    SEED: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
    KEGG: peroxiredoxin (alkyl hydroperoxide reductase subunit C)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.66 0.43
    2 PP_0123 DNA polymerase I, 5 0.62 0.30
    3 PP_3104 conserved protein of unknown function no 0.27
    4 PP_3668 Catalase-peroxidase no 0.26
    5 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.68 0.25
    6 PP_4507 potassium transporter 0.59 0.24
    7 PP_2820 HTH-type transcriptional regulator nfxB no 0.24
    8 PP_4700 pantothenate synthetase no 0.24
    9 PP_3359 putative Hydroxycinnamic acid degradation regulator no 0.23
    10 PP_1629 Protein RecA 0.74 0.23
    11 PP_4922 Phosphomethylpyrimidine synthase 0.38 0.23
    12 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.23
    13 PP_4940 Putative glycosyltransferase no 0.22
    14 PP_4723 Carbamoyl-phosphate synthase large chain 0.47 0.22
    15 PP_0513 DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP 0.83 0.22
    16 PP_5104 thiazole synthase 0.60 0.22
    17 PP_3649 Transcriptional regulator, GntR family 0.47 0.22
    18 PP_2087 CmpX protein no 0.22
    19 PP_5338 aspartate ammonia-lyase no 0.22
    20 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.51 0.22

    Or look for negative cofitness