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  • Top cofit genes for PP_2436 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3925 conserved protein of unknown function 0.17 0.80
    2 PP_4948 Acyl-CoA dehydrogenase family protein no 0.67
    3 PP_1941 conserved protein of unknown function no 0.58
    4 PP_0767 Transcriptional regulator, LuxR family 0.38 0.57
    5 PP_4817 MaoC domain protein 0.62 0.49
    6 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.44 0.48
    7 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.47 0.46
    8 PP_0370 Acyl-CoA dehydrogenase family protein 0.67 0.45
    9 PP_2818 Multidrug efflux RND transporter MexD 0.22 0.45
    10 PP_0765 putative adhesin (DUF1302) (from data) 0.45 0.42
    11 PP_3474 putative Curli fiber protein CsgE no 0.41
    12 PP_1386 Probable efflux pump periplasmic linker TtgA 0.33 0.40
    13 PP_1385 Probable efflux pump membrane transporter TtgB 0.34 0.39
    14 PP_5203 5-formyltetrahydrofolate cyclo-ligase no 0.37
    15 PP_2018 adhesin-associated BNR repeat protein (from data) 0.27 0.37
    16 PP_3923 Phosphoglycerate mutase no 0.35
    17 PP_2817 Multidrug efflux RND membrane fusion protein MexC no 0.34
    18 PP_0763 Medium-chain-fatty-acid CoA ligase 0.28 0.34
    19 PP_2335 methylcitrate synthase 0.49 0.34
    20 PP_2137 beta-ketoadipyl CoA thiolase, beta component no 0.34

    Or look for negative cofitness