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  • Top cofit genes for PP_2431 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0281 Amino acid ABC transporter, permease protein no 0.16
    2 PP_5053 Protein-export protein SecB no 0.15
    3 PP_5273 putative Oxidoreductase no 0.15
    4 PP_0369 putative diguanylate cyclase no 0.15
    5 PP_1411 GGDEF domain protein no 0.14
    6 PP_2617 conserved protein of unknown function no 0.14
    7 PP_1279 Probable alginate O-acetylase AlgJ no 0.14
    8 PP_4407 putative Gamma-aminobutyrate transporter no 0.14
    9 PP_3466 putative ABC efflux transporter, permease/ATP-binding protein no 0.14
    10 PP_2385 Branched-chain amino acid transport protein AzlC no 0.13
    11 PP_3246 Beta-carotene hydroxylase no 0.13
    12 PP_3536 conserved protein of unknown function no 0.13
    13 PP_1455 conserved protein of unknown function no 0.13
    14 PP_1281 Alginate lyase no 0.13
    15 PP_0211 conserved protein of unknown function no 0.13
    16 PP_0332 putative Acyltransferase 0.22 0.13
    17 PP_4836 conserved exported protein of unknown function no 0.13
    18 PP_2041 Transcriptional regulator, LysR family no 0.13
    19 PP_4648 Ribosomal RNA large subunit methyltransferase G no 0.13
    20 PP_2739 putative Sensory box protein no 0.13

    Or look for negative cofitness