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Cofit
Protein
Homologs
Top cofit genes for PP_2429 from
Pseudomonas putida KT2440
putative Membrane protein
SEED: Transporter, LysE family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1986
3-isopropylmalate dehydratase small subunit
0.25
0.30
2
PP
_2327
transcriptional dual regulator / CysB-O-acetyl-L-serine
no
0.30
3
PP
_1025
2-isopropylmalate synthase
0.28
0.29
4
PP
_3999
Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase
no
0.27
5
PP
_1304
sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase
no
0.26
6
PP
_1985
3-isopropylmalate dehydratase large subunit
0.26
0.26
7
PP
_5347
pyruvate carboxylase subunit A
no
0.26
8
PP
_1988
3-isopropylmalate dehydrogenase
0.27
0.26
9
PP
_2371
Sulphite reductase hemoprotein, beta subunit
no
0.26
10
PP
_0291
conserved protein of unknown function
no
0.25
11
PP
_5346
pyruvate carboxylase subunit B
no
0.25
12
PP
_1303
Sulfate adenylyltransferase subunit 2
no
0.25
13
PP
_2001
O-succinylhomoserine sulfhydrylase
no
0.25
14
PP
_2495
conserved protein of unknown function
no
0.25
15
PP
_0966
Histidinol dehydrogenase
no
0.24
16
PP
_5097
homoserine O-acetyltransferase
no
0.24
17
PP
_0421
Anthranilate phosphoribosyltransferase
no
0.24
18
PP
_0967
histidinol-phosphate aminotransferase (EC 2.6.1.9)
(from data)
no
0.24
19
PP
_5368
Major facilitator family transporter
no
0.24
20
PP
_5098
methionine biosynthesis protein MetW
no
0.24
Or look for
negative cofitness