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  • Top cofit genes for PP_2428 from Pseudomonas putida KT2440

    Probable sugar efflux transporter
    SEED: Sugar efflux transporter SotB
    KEGG: MFS transporter, DHA1 family, purine ribonucleoside efflux pump

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5283 periplasmic dipeptide transport protein no 0.44
    2 PP_1627 conserved protein of unknown function no 0.43
    3 PP_1798 Outer membrane efflux protein no 0.41
    4 PP_2148 transcription-repair coupling factor no 0.40
    5 PP_3627 conserved protein of unknown function no 0.40
    6 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.38 0.40
    7 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.43 0.38
    8 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.38
    9 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.13 0.38
    10 PP_5279 conserved protein of unknown function no 0.38
    11 PP_2027 conserved exported protein of unknown function 0.42 0.37
    12 PP_5284 UPF0758 protein PP_5284 0.14 0.37
    13 PP_1871 Protease HtpX no 0.37
    14 PP_0540 conserved inner membrane protein no 0.36
    15 PP_1355 Muropeptide permease AmpG 0.56 0.35
    16 PP_1797 HlyD family secretion protein no 0.35
    17 PP_1663 conserved exported protein of unknown function no 0.35
    18 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.35
    19 PP_1774 conserved exported protein of unknown function no 0.34
    20 PP_0941 putative ribosome associated protein no 0.34

    Or look for negative cofitness