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  • Top cofit genes for PP_2410 from Pseudomonas putida KT2440

    cation efflux system protein
    SEED: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
    KEGG: heavy-metal exporter, HME family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3260 DNA ligase D no 0.25
    2 PP_4804 RlpA-like lipoprotein no 0.24
    3 PP_1733 membrane ATPase of the MinC-MinD-MinE system no 0.22
    4 PP_5005 Poly(3-hydroxyalkanoate) polymerase 2 no 0.22
    5 PP_5217 Polyphosphate kinase no 0.21
    6 PP_4338 Chemotaxis histidine kinase CheA no 0.21
    7 PP_3208 Oxidoreductase, Pdr/VanB family no 0.20
    8 PP_4785 conserved exported protein of unknown function no 0.20
    9 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.20
    10 PP_4334 ParA family protein no 0.20
    11 PP_2878 conserved protein of unknown function no 0.20
    12 PP_0673 conserved protein of unknown function no 0.19
    13 PP_4333 CheW domain protein no 0.19
    14 PP_3614 conserved membrane protein of unknown function no 0.19
    15 PP_0138 conserved membrane protein of unknown function no 0.19
    16 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.19
    17 PP_3349 3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter no 0.19
    18 PP_3624 conserved exported protein of unknown function no 0.19
    19 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat no 0.19
    20 PP_0914 GGDEF domain protein no 0.18

    Or look for negative cofitness