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  • Top cofit genes for PP_2402 from Pseudomonas putida KT2440

    putative Sensor histidine kinase
    SEED: sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4804 RlpA-like lipoprotein 0.34 0.45
    2 PP_4902 Oligoribonuclease no 0.44
    3 PP_5310 junction-specific ATP-dependent DNA helicase 0.50 0.41
    4 PP_4880 exoribonuclease R 0.65 0.39
    5 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.38
    6 PP_4785 conserved exported protein of unknown function no 0.38
    7 PP_1719 Tail-specific protease prc 0.29 0.37
    8 PP_4895 tRNA dimethylallyltransferase 0.42 0.37
    9 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.35
    10 PP_4994 conserved protein of unknown function 0.46 0.35
    11 PP_1783 dTDP-glucose pyrophosphorylase no 0.34
    12 PP_5706 Sec translocation complex - SecG subunit no 0.34
    13 PP_4560 putative Ribonuclease BN 0.39 0.33
    14 PP_0725 conserved hypothetical TPR repeat protein no 0.32
    15 PP_4131 NADH-quinone oxidoreductase subunit N no 0.32
    16 PP_4124 NADH-quinone oxidoreductase subunit G no 0.31
    17 PP_0938 conserved protein of unknown function 0.45 0.31
    18 PP_2378 Fe/S biogenesis protein NfuA 0.17 0.31
    19 PP_5217 Polyphosphate kinase 0.52 0.30
    20 PP_5058 Carboxy-terminal-processing protease 0.51 0.30

    Or look for negative cofitness