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Cofit
Protein
Homologs
Top cofit genes for PP_2402 from
Pseudomonas putida KT2440
putative Sensor histidine kinase
SEED: sensor histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4804
RlpA-like lipoprotein
0.34
0.45
2
PP
_4902
Oligoribonuclease
no
0.44
3
PP
_5310
junction-specific ATP-dependent DNA helicase
0.51
0.41
4
PP
_4880
exoribonuclease R
0.53
0.39
5
PP
_1898
MotA/TolQ/ExbB proton channel family protein
no
0.38
6
PP
_4785
conserved exported protein of unknown function
no
0.38
7
PP
_1719
Tail-specific protease prc
0.29
0.37
8
PP
_4895
tRNA dimethylallyltransferase
0.42
0.37
9
PP
_1217
Holliday junction ATP-dependent DNA helicase RuvB
no
0.35
10
PP
_4994
conserved protein of unknown function
0.34
0.35
11
PP
_1783
dTDP-glucose pyrophosphorylase
no
0.34
12
PP
_5706
Sec translocation complex - SecG subunit
no
0.34
13
PP
_4560
putative Ribonuclease BN
0.32
0.33
14
PP
_0725
conserved hypothetical TPR repeat protein
no
0.32
15
PP
_4131
NADH-quinone oxidoreductase subunit N
no
0.32
16
PP
_4124
NADH-quinone oxidoreductase subunit G
no
0.31
17
PP
_0938
conserved protein of unknown function
0.45
0.31
18
PP
_2378
Fe/S biogenesis protein NfuA
no
0.31
19
PP
_5217
Polyphosphate kinase
0.49
0.30
20
PP
_5058
Carboxy-terminal-processing protease
0.51
0.30
Or look for
negative cofitness