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  • Top cofit genes for PP_2399 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG005107: hypothetical protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.19
    2 PP_4911 conserved protein of unknown function no 0.19
    3 PP_4078 conserved protein of unknown function no 0.18
    4 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.36 0.18
    5 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase no 0.17
    6 PP_4723 Carbamoyl-phosphate synthase large chain 0.23 0.17
    7 PP_1988 3-isopropylmalate dehydrogenase no 0.17
    8 PP_5098 methionine biosynthesis protein MetW no 0.17
    9 PP_2001 O-succinylhomoserine sulfhydrylase no 0.17
    10 PP_0860 putative Sulfite reductase, flavoprotein component no 0.17
    11 PP_1986 3-isopropylmalate dehydratase small subunit no 0.17
    12 PP_3511 Branched-chain-amino-acid aminotransferase no 0.17
    13 PP_2406 putative quinate/shikimate dehydrogenase no 0.17
    14 PP_2401 conserved membrane protein of unknown function no 0.17
    15 PP_0417 Anthranilate synthase component 1 no 0.16
    16 PP_4678 Ketol-acid reductoisomerase no 0.16
    17 PP_5261 Transcriptional regulator, LysR family 0.26 0.16
    18 PP_3900 hypothetical protein no 0.16
    19 PP_2561 putative secreted hemolysin-type calcium-binding bacteriocin no 0.16
    20 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.16

    Or look for negative cofitness