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  • Top cofit genes for PP_2393 from Pseudomonas putida KT2440

    DNA polymerase II
    SEED: DNA polymerase II (EC 2.7.7.7)
    KEGG: DNA polymerase II

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1739 conserved membrane protein of unknown function no 0.20
    2 PP_2418 putative cobalamin ABC transporter, periplasmic no 0.20
    3 PP_4244 alternative sigma factor no 0.19
    4 PP_0506 putative ABC efflux transporter, permease protein no 0.19
    5 PP_2064 Multidrug efflux RND membrane fusion protein 0.46 0.19
    6 PP_4837 conserved protein of unknown function no 0.19
    7 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.18
    8 PP_2714 Sensor histidine kinase no 0.18
    9 PP_3346 Nickel transporter ATP-binding protein no 0.18
    10 PP_5009 conserved protein of unknown function no 0.17
    11 PP_3790 diaminopimelate epimerase no 0.17
    12 PP_1301 quality control serine endoprotease DegS 0.28 0.17
    13 PP_1105 putative DNA ligase, ATP-dependent 0.42 0.17
    14 PP_2406 putative quinate/shikimate dehydrogenase 0.35 0.17
    15 PP_5261 Transcriptional regulator, LysR family no 0.17
    16 PP_3376 putative phosphonate dehydrogenase 0.63 0.17
    17 PP_4272 conserved membrane protein of unknown function no 0.17
    18 PP_2609 Transcriptional regulator, IclR family no 0.17
    19 PP_4498 Segregation and condensation protein A 0.45 0.16
    20 PP_5603 putative FAD dependent oxidoreductase 0.27 0.16

    Or look for negative cofitness