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  • Top cofit genes for PP_2390 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2388 Transporter, LysE family 0.87 0.84
    2 PP_2389 conserved protein of unknown function no 0.67
    3 PP_3788 putative Non-ribosomal peptide synthetase no 0.50
    4 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.69 0.49
    5 PP_3790 diaminopimelate epimerase no 0.49
    6 PP_3786 aminotransferase no 0.45
    7 PP_3787 conserved protein of unknown function no 0.44
    8 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex 0.65 0.43
    9 PP_0291 conserved protein of unknown function 0.55 0.42
    10 PP_5097 homoserine O-acetyltransferase 0.79 0.41
    11 PP_2001 O-succinylhomoserine sulfhydrylase 0.81 0.41
    12 PP_4890 ATP phosphoribosyltransferase regulatory subunit 0.78 0.41
    13 PP_3789 putative Efflux transporter no 0.40
    14 PP_1426 L-aspartate oxidase 0.57 0.40
    15 PP_5098 methionine biosynthesis protein MetW 0.80 0.40
    16 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 0.78 0.40
    17 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit no 0.39
    18 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.39
    19 PP_1912 Phosphate acyltransferase 0.59 0.39
    20 PP_1109 Transcriptional regulator, GntR family 0.63 0.39

    Or look for negative cofitness