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  • Top cofit genes for PP_2388 from Pseudomonas putida KT2440

    Transporter, LysE family
    SEED: Efflux protein, LysE family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2390 Transcriptional regulator, LysR family 0.87 0.84
    2 PP_2389 conserved protein of unknown function no 0.58
    3 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.75 0.54
    4 PP_3790 diaminopimelate epimerase no 0.54
    5 PP_3788 putative Non-ribosomal peptide synthetase no 0.53
    6 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.49
    7 PP_3786 aminotransferase no 0.48
    8 PP_2001 O-succinylhomoserine sulfhydrylase no 0.48
    9 PP_4890 ATP phosphoribosyltransferase regulatory subunit 0.75 0.48
    10 PP_5097 homoserine O-acetyltransferase 0.68 0.47
    11 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.47
    12 PP_3787 conserved protein of unknown function no 0.47
    13 PP_5098 methionine biosynthesis protein MetW 0.68 0.46
    14 PP_3789 putative Efflux transporter no 0.45
    15 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 0.72 0.44
    16 PP_0291 conserved protein of unknown function no 0.44
    17 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit no 0.44
    18 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.71 0.43
    19 PP_4678 Ketol-acid reductoisomerase 0.74 0.43
    20 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.43

    Or look for negative cofitness