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  • Top cofit genes for PP_2378 from Pseudomonas putida KT2440

    Fe/S biogenesis protein NfuA
    SEED: NfuA Fe-S protein maturation
    KEGG: Fe/S biogenesis protein NfuA

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4546 ATP-dependent helicase HrpA no 0.43
    2 PP_4124 NADH-quinone oxidoreductase subunit G 0.82 0.39
    3 PP_4880 exoribonuclease R 0.76 0.38
    4 PP_4824 Sensor histidine kinase/response regulator 0.48 0.37
    5 PP_4131 NADH-quinone oxidoreductase subunit N 0.79 0.37
    6 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.36
    7 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.69 0.36
    8 PP_2144 Transcriptional regulator, TetR family 0.47 0.36
    9 PP_4507 potassium transporter 0.80 0.36
    10 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.79 0.35
    11 PP_4120 NADH-quinone oxidoreductase subunit B 0.66 0.34
    12 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.86 0.34
    13 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.57 0.34
    14 PP_0065 NAD-binding component of TrK potassium transporter 0.84 0.33
    15 PP_5028 proline iminopeptidase no 0.33
    16 PP_5310 junction-specific ATP-dependent DNA helicase 0.61 0.33
    17 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I 0.49 0.33
    18 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase no 0.32
    19 PP_1362 pyruvate kinase II 0.66 0.32
    20 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.80 0.31

    Or look for negative cofitness