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  • Top cofit genes for PP_2372 from Pseudomonas putida KT2440

    putative Periplasmic sugar-binding protein
    SEED: Periplasmic sugar-binding domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1490 Probable biofilm formation methyltransferase WspC 0.59 0.32
    2 PP_2413 GGDEF family protein no 0.30
    3 PP_1488 Methyl-accepting chemotaxis transducer 0.48 0.27
    4 PP_1492 Sensor histidine kinase/response regulator 0.16 0.26
    5 PP_0563 Response regulator no 0.24
    6 PP_1494 Response regulator/GGDEF domain protein 0.19 0.24
    7 PP_5429 protein of unknown function no 0.24
    8 PP_4670 diguanylate cyclase 0.57 0.24
    9 PP_5283 periplasmic dipeptide transport protein no 0.22
    10 PP_3761 Sensor histidine kinase/response regulator no 0.22
    11 PP_2646 conserved protein of unknown function no 0.22
    12 PP_4620 Fumarylacetoacetase no 0.20
    13 PP_3769 conserved exported protein of unknown function no 0.20
    14 PP_0672 Sensory box protein no 0.19
    15 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) no 0.19
    16 PP_0168 putative surface adhesion protein no 0.19
    17 PP_0173 putative transcriptional factor-related protein no 0.19
    18 PP_0850 Dual-specificity RNA methyltransferase RlmN no 0.19
    19 PP_0166 HlyD family secretion protein 0.17 0.19
    20 PP_4373 Transcriptional regulator FleQ no 0.18

    Or look for negative cofitness