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  • Top cofit genes for PP_2360 from Pseudomonas putida KT2440

    putative type 1 pili subunit CsuA/B protein
    SEED: Sigma-fimbriae uncharacterized paralogous subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2363 conserved protein of unknown function 0.62 0.28
    2 PP_2362 putative usher protein 0.61 0.24
    3 PP_2511 conserved protein of unknown function no 0.22
    4 PP_0803 Protein secretion ABC efflux system, membrane fusion protein 0.41 0.21
    5 PP_0806 putative Surface adhesion protein no 0.20
    6 PP_2359 putative Type 1 pili subunit CsuA/B protein 0.54 0.20
    7 PP_0574 DNA-binding response regulator, LuxR family no 0.19
    8 PP_0805 Outer membrane efflux protein no 0.19
    9 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein 0.46 0.19
    10 PP_3879 Phage portal protein, HK97 family no 0.18
    11 PP_2743 Acetyltransferase, GNAT family no 0.18
    12 PP_2777 putative Acyl carrier protein no 0.18
    13 PP_1877 free methionine-(R)-sulfoxide reductase no 0.17
    14 PP_4371 two component system AtoC DNA-binding transcriptional activator no 0.16
    15 PP_3085 putative Transmembrane sensor no 0.16
    16 PP_5553 conserved protein of unknown function no 0.16
    17 PP_0839 tRNA Cm32/Um32 methyltransferase no 0.16
    18 PP_4778 23S rRNA pseudouridine 2457 synthase no 0.16
    19 PP_0265 dTDP-4-dehydrorhamnose 3,5-epimerase no 0.15
    20 PP_3034 putative Regulator protein no 0.15

    Or look for negative cofitness