Top cofit genes for PP_2355 from Pseudomonas putida KT2440

Response regulator receiver protein
SEED: response regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5597		conserved protein of unknown function	no	0.21
2	PP_3736		vanillate O-demethylase oxygenase subunit	no	0.21
3	PP_3951		3-oxoadipate CoA-transferase subunit A	no	0.19
4	PP_1378		alpha-ketoglutarate permease	0.40	0.19
5	PP_3737		vanillate O-demethylase oxidoreductase	no	0.19
6	PP_3356		p-coumarate CoA-ligase (EC 6.2.1.12) (from data)	no	0.19
7	PP_2726		conserved membrane protein of unknown function	no	0.19
8	PP_1375		transcription regulatory protein (pca regulon)	0.28	0.19
9	PP_2354		Sensory box histidine kinase/response regulator	no	0.19
10	PP_4656		protocatechuate 3,4-dioxygenase beta chain	no	0.18
11	PP_1379		3-carboxy-cis,cis-muconate cycloisomerase	no	0.18
12	PP_3952		3-oxoadipate CoA-transferase subunit A	no	0.18
13	PP_3287		transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family	no	0.18
14	PP_4371		two component system AtoC DNA-binding transcriptional activator	0.48	0.17
15	PP_1377		beta-ketoadipyl-CoA thiolase	no	0.17
16	PP_2640		Acetyltransferase, GNAT family	no	0.17
17	PP_4655		protocatechuate 3,4-dioxygenase alpha chain	no	0.17
18	PP_3256		Glycosyl transferase, group 2 family protein	no	0.17
19	PP_1380		3-oxoadipate enol-lactonase 2	no	0.17
20	PP_4586		conserved exported protein of unknown function	0.29	0.17

Or look for negative cofitness