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  • Top cofit genes for PP_2352 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: ATPase component BioM of energizing module of biotin ECF transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.37 0.27
    2 PP_3952 3-oxoadipate CoA-transferase subunit A no 0.27
    3 PP_3951 3-oxoadipate CoA-transferase subunit A no 0.26
    4 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.39 0.26
    5 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.37 0.25
    6 PP_1380 3-oxoadipate enol-lactonase 2 0.38 0.25
    7 PP_1375 transcription regulatory protein (pca regulon) 0.40 0.24
    8 PP_1377 beta-ketoadipyl-CoA thiolase 0.36 0.24
    9 PP_1378 alpha-ketoglutarate permease 0.40 0.24
    10 PP_1381 4-carboxymuconolactone decarboxylase 0.36 0.23
    11 PP_1878 conserved protein of unknown function no 0.23
    12 PP_0941 putative ribosome associated protein no 0.20
    13 PP_0937 endoribonuclease G (RNAse G) 0.31 0.20
    14 PP_3544 Transcriptional regulator, GntR family 0.17 0.19
    15 PP_3256 Glycosyl transferase, group 2 family protein no 0.19
    16 PP_1713 Transcriptional regulator PcaQ no 0.19
    17 PP_2927 conserved protein of unknown function no 0.19
    18 PP_3466 putative ABC efflux transporter, permease/ATP-binding protein no 0.18
    19 PP_1376 4-hydroxybenzoate transporter 0.19 0.18
    20 PP_0096 oligopeptidase A 0.32 0.18

    Or look for negative cofitness