Top cofit genes for PP_2347 from Pseudomonas putida KT2440

DNA-binding response regulator
SEED: Two-component system response regulator QseB

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4178		Dienelactone hydrolase family protein	0.44	0.20
2	PP_4243		non-ribosomal peptide synthase (subunit of ferribactin synthase)	0.18	0.20
3	PP_4311		putative D-amino acid dehydrogenase 2 small subunit	no	0.18
4	PP_4504		conserved exported protein of unknown function	0.30	0.18
5	PP_3348		GGDEF domain protein	0.59	0.18
6	PP_1854		conserved protein of unknown function	0.61	0.17
7	PP_4220		non-ribosomal peptide synthetase (subunit of ferribactin synthase)	no	0.17
8	PP_3095		Protein ClpV1	no	0.17
9	PP_0675		glutamate dehydrogenase, NADP-dependent	0.27	0.17
10	PP_4222		putative SyrP protein	no	0.17
11	PP_3857		conserved protein of unknown function	no	0.16
12	PP_0227		periplasmic cystine-binding protein	0.42	0.16
13	PP_1291		PhoH family protein	0.16	0.16
14	PP_0122		conserved exported protein of unknown function	no	0.16
15	PP_4219		non-ribosomal peptide synthetase	no	0.16
16	PP_4242		conserved protein of unknown function with Rhs repeat-associated core domain	no	0.15
17	PP_5126		conserved protein of unknown function containing an HDOD domain	no	0.15
18	PP_4511		Transcriptional regulator, AraC family	0.43	0.15
19	PP_3341		nickel-responsive regulator	no	0.15
20	PP_2829		Transcriptional regulator, GntR family	no	0.15

Or look for negative cofitness