Top cofit genes for PP_2337 from Pseudomonas putida KT2440

aconitate isomerase
SEED: 2-methylaconitate cis-trans isomerase
KEGG: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2336		aconitate hydratase 1	0.98	0.72
2	PP_2334		2-methylisocitrate lyase	0.92	0.54
3	PP_2335		methylcitrate synthase	0.89	0.46
4	PP_2333		GntR family transcriptional regulator	0.71	0.41
5	PP_2302		DNA-binding, ATP-dependent protease	0.62	0.35
6	PP_1353		conserved membrane protein of unknown function	0.45	0.34
7	PP_3248		Dyp-type peroxidase family protein	no	0.34
8	PP_4121		NADH-quinone oxidoreductase subunit C/D	no	0.32
9	PP_4799		putative Muramoyltetrapeptide carboxypeptidase	no	0.32
10	PP_4964		D-erythrose 4-phosphate dehydrogenase	no	0.32
11	PP_4403		Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex	0.89	0.32
12	PP_4700		pantothenate synthetase	no	0.31
13	PP_4693		RNA polymerase-binding transcription factor DksA	0.41	0.31
14	PP_4124		NADH-quinone oxidoreductase subunit G	0.33	0.31
15	PP_4131		NADH-quinone oxidoreductase subunit N	no	0.30
16	PP_5352		DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex	0.68	0.30
17	PP_4401		branched-chain alpha-keto acid dehydrogenase complex, alpha subunit	0.90	0.30
18	PP_4667		methylmalonate-semialdehyde dehydrogenase	0.91	0.30
19	PP_1994		tRNA pseudouridine (38-40)synthase	0.56	0.30
20	PP_1629		Protein RecA	no	0.30

Or look for negative cofitness